Are the old International Board for Plant Genetic Resources (IBPGR) base collections available through the Plant Treaty's multilateral system of access and benefit sharing? A review

In 1975, the International Board for Plant Genetic Resources created the first internationally linked system of genebanks, known as the Registry of Base Collections (RBC), to conserve plant germplasm and make it available globally for agricultural research and development. Over time, international efforts shifted away from enhancing and building the RBC toward other means to promote the conservation and sustainable use of plant genetic resources. Perhaps the most important development in this regard was the negotiation of the International Treaty on Plant Genetic Resources for Food and Agriculture (Plant Treaty or ITPGRFA) and the development of its multilateral system for access and benefit sharing (multilateral system). Our study aimed to ascertain whether the RBC materials are still being conserved/curated in the original recipient organizations. We also sought to assess whether those materials have been included in, and are available through, the ITPGRFA's multilateral system. This outcome would be significant since, in many ways, the multilateral system reflects the spirit, commitment, and objectives of the RBC, with important additional components (e.g. obligations to share monetary benefits derived from the uses of plant genetic resources for food and agriculture). We identify four levels of probability that RBC materials are included in, and available through, the multilateral system. Ultimately, we find that there is a high level of probability that approximately 80% of the RBC materials are currently available through the multilateral system. We further identify a number of possible interventions that could be made to ensure that all RBC materials are conserved and made available through the multilateral system (or on similar terms and conditions of facilitated access and benefit sharing)

A critical review of the current global ex situ conservation system for plant agrobiodiversity. II. Strengths and weaknesses of the current system and recommendations for its improvement

In this paper, we review gene bank operations that have an influence on the global conservation system, with the intention to identify critical aspects that should be improved for optimum performance. We describe the role of active and base collections and the importance of linking germplasm conservation and use, also in view of new developments in genomics and phenomics that facilitate more effective and efficient conservation and use of plant agrobiodiversity. Strengths, limitations, and opportunities of the existing global ex situ conservation system are discussed, and measures are proposed to achieve a rational, more effective, and efficient global system for germplasm conservation and sustainable use. The proposed measures include filling genetic and geographic gaps in current ex situ collections; determining unique accessions at the global level for long-term conservation in virtual base collections; intensifying existing international collaborations among gene banks and forging collaborations with the botanic gardens community; increasing investment in conservation research and user-oriented supportive research; improved accession-level description of the genetic diversity of crop collections; improvements of the legal and policy framework; and oversight of the proposed network of global base collections

A critical review of the current global ex situ conservation system for plant agrobiodiversity. I. History of the development of the global system in the context of the political/legal framework and its major conservation components

The history of ex situ conservation is relatively short, not more than a century old. During the middle of last century, triggered by the realization that genetic erosion was threatening the existing landraces and wild relatives of the major food crops, global efforts to collect and conserve the genetic diversity of these threatened resources were initiated, predominantly orchestrated by FAO. National and international genebanks were established to store and maintain germplasm materials, conservation methodologies were created, standards developed, and coordinating efforts were put in place to ensure effective and efficient approaches and collaboration. In the spontaneously developing global conservation system, plant breeders played an important role, aiming at the availability of genetic diversity in their breeding work. Furthermore, long-term conservation and the safety of the collected materials were the other two overriding criteria that led to the emerging international network of ex situ base collections. The political framework for the conservation of plant genetic resources finds its roots in the International Undertaking of the FAO and became ‘turbulent rapid’ with the conclusion of the Convention on Biological Diversity. This paper reviews the history of the global ex situ conservation system with a focus on the international network of base collections. It assesses the major ex situ conservation approaches and methods with their strengths and weaknesses with respect to the global conservation system and highlights the importance of combining in situ and ex situ conservation

Plant biodiversity and genetic resources matter!

Plant biodiversity is the foundation of our present-day food supply (including functional food and medicine) and offers humankind multiple other benefits in terms of ecosystem functions and resilience to climate change, as well as other perturbations. This Special Issue on ‘Plant Biodiversity and Genetic Resources’ comprises 32 papers covering a wide array of aspects from the definition and identification of hotspots of wild and domesticated plant biodiversity to the specifics of conservation of genetic resources of crop genepools, including breeding and research materials, landraces and crop wild relatives which collectively are the pillars of modern plant breeding, as well as of localized breeding efforts by farmers and farming communities. The integration of genomics and phenomics into germplasm and genebank management enhances the value of crop germplasm conserved ex situ, and is likely to increase its utilization in plant breeding, but presents major challenges for data management and the sharing of this information with potential users. Furthermore, also a better integration of in situ and ex situ conservation efforts will contribute to a more effective conservation and certainly to a more sustainable and efficient utilization. Other aspects such as policy, access and benefit-sharing that directly impact the use of plant biodiversity and genetic resources, as well as balanced nutrition and enhanced resilience of production systems that depend on their increased use, are also being treated. The editorial concludes with six key messages on plant biodiversity, genetic erosion, genetic resources and plant breeding, agricultural diversification, conservation of agrobiodiversity, and the evolving role and importance of genebanks

AEGIS, the Virtual European Genebank: Why it is such a good idea, why it is not working and how it could be improved

In this opinion paper, the authors describe the principles of the decentralized European virtual genebank (AEGIS) and analyze the reasons for its lack of success and why the European Cooperative Programme for Plant Genetic Resources (ECPGR) has not been able to improve this situation so far significantly. Possible changes for making AEGIS a success, or at least steps in the right direction, are proposed. These changes center around the creation of a system of certified genebanks with proper quality management, guaranteeing the long-term conservation of, and immediate access to the plant genetic resources conserved in it

Geography of genetic structure in barley wild relative Hordeum vulgare subsp. spontaneum in Jordan

Informed collecting, conservation, monitoring and utilization of genetic diversity requires knowledge of the distribution and structure of the variation occurring in a species. Hordeum vulgare subsp. spontaneum (K. Koch) Thell., a primary wild relative of barley, is an important source of genetic diversity for barley improvement and co-occurs with the domesticate within the center of origin. We studied the current distribution of genetic diversity and population structure in H. vulgare subsp. spontaneum in Jordan and investigated whether it is correlated with either spatial or climatic variation inferred from publically available climate layers commonly used in conservation and ecogeographical studies. The genetic structure of 32 populations collected in 2012 was analyzed with 37 SSRs. Three distinct genetic clusters were identified. Populations were characterized by admixture and high allelic richness, and genetic diversity was concentrated in the northern part of the study area. Genetic structure, spatial location and climate were not correlated. This may point out a limitation in using large scale climatic data layers to predict genetic diversity, especially as it is applied to regional genetic resources collections in H. vulgare subsp. spontaneum

Patterns of domestication in the Ethiopian oil-seed crop noug (Guizotia abyssinica)

Noug (Guizotia abyssinica) is a semidomesticated oil-seed crop, which is primarily cultivated in Ethiopia. Unlike its closest crop relative, sunflower, noug has small seeds, small flowering heads, many branches, many flowering heads, and indeterminate flowering, and it shatters in the field. Here, we conducted common garden studies and microsatellite analyses of genetic variation to test whether high levels of crop–wild gene flow and/or unfavorable phenotypic correlations have hindered noug domestication. With the exception of one population, analyses of microsatellite variation failed to detect substantial recent admixture between noug and its wild progenitor. Likewise, only very weak correlations were found between seed mass and the number or size of flowering heads. Thus, noug's ‘atypical’ domestication syndrome does not seem to be a consequence of recent introgression or unfavorable phenotypic correlations. Nonetheless, our data do reveal evidence of local adaptation of noug cultivars to different precipitation regimes, as well as high levels of phenotypic plasticity, which may permit reasonable yields under diverse environmental conditions. Why noug has not been fully domesticated remains a mystery, but perhaps early farmers selected for resilience to episodic drought or untended environments rather than larger seeds. Domestication may also have been slowed by noug's outcrossing mating syste

Type-safe evolution of spreadsheets

Lecture Notes in Computer Science Volume 6603, 2011Spreadsheets are notoriously error-prone. To help avoid the introduction of errors when changing spreadsheets, models that capture the structure and interdependencies of spreadsheets at a conceptual level have been proposed. Thus, spreadsheet evolution can be made safe within the confines of a model. As in any other model/instance setting, evolution may not only require changes at the instance level but also at the model level. When model changes are required, the safety of instance evolution can not be guarded by the model alone. We have designed an appropriate representation of spreadsheet models, including the fundamental notions of formulæand references. For these models and their instances, we have designed coupled transformation rules that cover specific spreadsheet evolution steps, such as the insertion of columns in all occurrences of a repeated block of cells. Each model-level transformation rule is coupled with instance level migration rules from the source to the target model and vice versa. These coupled rules can be composed to create compound transformations at the model level inducing compound transformations at the instance level. This approach guarantees safe evolution of spreadsheets even when models change.Supported by Fundac ao para a Ciencia e a Tecnologia, grant no. SFRH/BD/30231/2006. Supported by Fundac ao para a Ciencia e a Tecnologia, grant no. SFRH/BD/30215/2006. Work supported by the SSaaPP project, FCT contract no. PTDC/EIA-CCO/108613/200